Installation of jV

System requirements
jV3 runs on the Java Runtime Environment (JRE) with JOGL API. The version requirements are as follows. These softwares are available on typical operation systems such as Windows (2000/XP/Vista), Mac OS X 10.3 or later, and Red Hat Linux 7.3 or later.
 * JRE (includes Java Plug-in) 1.4.2 or later
 * JOGL API JSR-231 1.0.0 or later

Automatic install
In this section, it is assumed that JRE 1.4.2 or later has been installed on your computer. Installing JOGL is just deploying several files to JRE. A tool that automatically performs the JOGL installation with a graphical user interface is available at jV version 3.

Manual install
It is also possible to install JOGL manually. According to the kind of your operation system, you should get the following files from JOGL.

Windows
The folder that JRE has been installed is denoted by . It depends on the environment, however it is typically as follows. =C:\Program Files\Java\j2re1.4.2_12 The files ‘jogl.jar’ and ‘gluegen-rt.jar’ should be copied to \lib\ext, and the other files should be copied to \bin.

Mac OS X
When operating from the command terminal, you should copy all files to /Library/Java/Extensions. When operating through the graphical interface, the above destination folder is shown as ‘Macintosh HD/Library/Java/Extensions’. In this operation, the password for root is required.

Linux
The directory that JRE has been installed is denoted by . It depends on the environment, however it is typically as follows. =/usr/java/j2sdk1.4.2_12/jre files ‘jogl.jar’ and ‘gluegen-rt.jar’ should be copied to /lib/ext, and the other files should be copied to /lib/i386.

Download jV
In order to obtain jV and PDBjViewer you must agree to the software license. Registration is required. When the registration is completed, a URL for downloading the source code of jV and PDBjViewer is sent to you by email. The URL is valid for 24 hours.
 * Download jV
 * binary
 * sourcecode
 * JOGL 1.0, 1.1.1 or JSR-231 1.0.0 (recommend JSR-231)


 * version 1.0 [Windows,Mac OS X,Linux]
 * version 1.1.1 [Windows,Mac OS X, Linux]
 * JSR-231 1.0.0 [Windows, Mac OS X ppc, Mac OS X universal, Linux]

Note:  JOGL 1.0 and 1.1.1 are not available for Intel Mac.The latest version of JOGL, JSR-231 1.0.0, runs on Intel Mac.